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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015886110.1_cds_XP_016440225.1_35702
CDS Infomation

[gene=LOC107766028] [db_xref=GeneID:107766028] [protein=UPF0505 protein C16orf62 homolog isoform X3] [protein_id=XP_016440225.1] [location=join(7523..7564,8003..8033,8496..8677,9441..9597,10210..10306,11173..11342,16984..17156,21893..22081,22168..22257,27052..27132,27428..27463)] [gbkey=CDS]
Sequence

ATGCAAAAATTTCCTGTCTCCAAAATGATTTCTGTTTCTTCGCTGTCAAGCTCAATTATG
AAGACAGGCAAGGGCACTGAGAAACCCTCAGCAAATGCACATCTAGAGGAGCTAGATGAT
CCTCAGAGATTTGCTGAAGGTGTTAAATATATCACCCTGCAGGAGTATGTCTCACGCTTA
ACTGAACTTAAAGATGAAATTAGTCGTGCCTGGCATGCAAATGACCGTGTAACCTCCTTT
AATTTGTCAATCAAGGTTGCTAAGCTACTGTCGGATACATCTGTACTACAATTTTATCCA
ACGTTATTTGTCCTAGCTACAGAAATACTAGATATGTTAGGGGATATGGTATGGGAACGC
ATCAGGCAGAAAGCTGAATACACTGAAGATGGGACGTTAGTCCATTTACCAGGTAACTTT
CGAGCAACTGAAATCTGTGCTGAAGCCAAAGAAACCTGCTATAACTGGTTCTTCAAAGTT
GGTTCCATCCGCGAGCTATTGCCACGCATATACTTGGAGCTGGCGATATTCCATTGCTGG
CGTTTCCTTCTGCAAAAACCTGCTGATAATCTTCCACGGCTAGTTATGATGGCGAGAGGC
ATTGCAGATCCATTAGTTTCATTTTATTGCTGCTTATATTTGGCCCACTGTGCACAAAAG
TTACCTCAACGGGACATAGGACATCTGATAATTTCTATGAATGACATGAACACTCTTCTG
ATGAATGGTGCACATGTTGCATCTGTGGAGAAAACATCTGGAGTTCTATCAGGAAATCGA
AGTTCAAAACTGGGCCTGATGGAACCAGCTATTGAATATGTTATGAAATGCTTGTTCAGG
GAGTCATGTGAGTTGCAAGTTGGAGAGATATTGATGGGGCTTGGACTTGGGAGGAACCAA
TCAGAGTTGTTTGGAAACTCATCATGCATCTCGCTTGTTCTTCACCATTTATTAAAGGAA
CTTCCTATAGAAATAATTTTTTCTAATGCCTTGGACATTCTTCATCTCATTGAGTGTAGC
TATGATTACTCCTTTGATCAGTGTTTGAATTTTAAGTTACTTGGACTCAGACTATGTGAA
AACATATCTCAAGTGAATGAAGTCAATTTGGTAATGAAGAAGGTTATTCAGGTTGTTTCT
CGGTTTAATAGCCTTGATGAGTACCTCAATGTTGTAGATGCTCATATAGATATTGCTCTC
CAGAAACACATGGGTGTAGGAAATTCCAAGAAACATATTAGACAATGA

Peptide Sequence

PEP ID

XP_016440225.1
PEP Infomation

PREDICTED: UPF0505 protein C16orf62 homolog isoform X3 [Nicotiana tabacum]
Sequence

MQKFPVSKMISVSSLSSSIMKTGKGTEKPSANAHLEELDDPQRFAEGVKYITLQEYVSRL
TELKDEISRAWHANDRVTSFNLSIKVAKLLSDTSVLQFYPTLFVLATEILDMLGDMVWER
IRQKAEYTEDGTLVHLPGNFRATEICAEAKETCYNWFFKVGSIRELLPRIYLELAIFHCW
RFLLQKPADNLPRLVMMARGIADPLVSFYCCLYLAHCAQKLPQRDIGHLIISMNDMNTLL
MNGAHVASVEKTSGVLSGNRSSKLGLMEPAIEYVMKCLFRESCELQVGEILMGLGLGRNQ
SELFGNSSCISLVLHHLLKELPIEIIFSNALDILHLIECSYDYSFDQCLNFKLLGLRLCE
NISQVNEVNLVMKKVIQVVSRFNSLDEYLNVVDAHIDIALQKHMGVGNSKKHIRQ

Transcript Sequence

Gene sequence data has not been registered.